Workbench MCP Server
https://seqbench.com/api/mcp
Remote
v1.1.0
Published by seqbench.com — no publish provenance and no public repository, so the publisher could not be verified and the source cannot be independently located.
Hosted DNA/RNA/protein tools: primers, oligos, PCR, cloning, CRISPR, alignment, batch & pipelines.
The grade answers one question — how safe is this server for you to adopt — so it is computed in two auditable stages. Nothing below is an opinion or an LLM's guess; every line is a real term the deterministic engine applied, and the same input always yields the same number.
1. Threat score — 100 − 0 = 100. What the published surface and source actually contain:
The deterministic scan raised no scored threat in the surface it inspected — the threat score stayed at 100. Capability observations and advisory notes are recorded but never lower it.
2. Client adoption risk — 100 − 3 = 97. Three small, subtract-only factors that reflect your risk in adopting it — a clean scan proves less on a powerful, unverified or barely-inspectable package, so the grade says so plainly:
| Points | Adoption-risk factor |
|---|---|
| −3 | capability blast radius (moderate) — client exposure if the model is manipulated |
Capability observations and info notes are shown under Findings but never scored.
Open any row's finding below for the file, line and evidence behind a deduction.
Findings 1
medium Untrusted input can drive an external actionMTC-FLOW-005
Untrusted-input tools ([session_get, sequence_fetch, sequence_search, web_search]) co-exist with external-action tools ([sequence_format_convert]). A prompt injection could cause unwanted external actions, though no direct sensitive-data leak path was found.
Evidence: untrusted [session_get, sequence_fetch, sequence_search, web_search] → sinks [sequence_format_convert]
Fix: Require confirmation for state-changing/egress actions triggered after processing untrusted content.
Location: flow session_get → sequence_format_convert
Tools 84
Each tool and what it can reach — enumerated from the running server.
sequence_fetchingests untrusted inputsequence_format_convertnetwork egresssequence_searchingests untrusted inputsession_getingests untrusted inputweb_searchingests untrusted inputalphafold_lookupno sensitive capabilityaso_designno sensitive capabilitybase_editing_designno sensitive capabilitybatchno sensitive capabilitycharacterize_sequenceno sensitive capability
Show 74 more tools ↓
cloning_simulateno sensitive capabilitycodon_adaptation_indexno sensitive capabilitycodon_optimizeno sensitive capabilityconstruct_autofixno sensitive capabilityconstruct_qcno sensitive capabilitycrispr_grna_designno sensitive capabilitycrispr_hdr_donorno sensitive capabilitycrispr_offtarget_checkno sensitive capabilitycross_dimerno sensitive capabilitydna_molarityno sensitive capabilitydouble_digestno sensitive capabilityexport_echo_picklistno sensitive capabilityexport_opentrons_protocolno sensitive capabilityexport_plate_layoutno sensitive capabilityexpression_heatmap_clusterno sensitive capabilityfastq_qc_reportno sensitive capabilityfastq_trimno sensitive capabilityfind_orfsno sensitive capabilityformat_sequenceno sensitive capabilityfunctional_enrichmentno sensitive capabilitygc_contentno sensitive capabilitygene_dossierno sensitive capabilitygene_expressionno sensitive capabilitygene_modelno sensitive capabilitygolden_gate_fidelityno sensitive capabilityhgvs_convertno sensitive capabilityid_map_pollno sensitive capabilityid_map_submitno sensitive capabilityin_silico_pcrno sensitive capabilitykasp_primer_designno sensitive capabilitymelting_temperatureno sensitive capabilitymotif_finderno sensitive capabilitymultiple_sequence_alignmentno sensitive capabilityoligo_analysisno sensitive capabilityortholog_mapno sensitive capabilitypairwise_alignmentno sensitive capabilityparse_genbankno sensitive capabilityparse_sanger_traceno sensitive capabilityplasmid_annotateno sensitive capabilityplasmid_deep_annotateno sensitive capabilityplasmid_full_reportno sensitive capabilityplasmid_identifyno sensitive capabilityprime_editing_designno sensitive capabilityprime_editing_twin_designno sensitive capabilityprimer_designno sensitive capabilityprimer_specificityno sensitive capabilityprotease_digestionno sensitive capabilityprotein_annotate_pollno sensitive capabilityprotein_annotate_submitno sensitive capabilityprotein_hydrophobicityno sensitive capabilityprotein_propertiesno sensitive capabilityrandom_sequenceno sensitive capabilityrestriction_sitesno sensitive capabilityreverse_complementno sensitive capabilityreverse_translateno sensitive capabilityrna_foldno sensitive capabilitysanger_vs_referenceno sensitive capabilitysave_permalinkno sensitive capabilityseqfile_statsno sensitive capabilitysequence_reportno sensitive capabilitysequencing_readback_verifyno sensitive capabilitysession_createno sensitive capabilitysession_runno sensitive capabilitysession_setno sensitive capabilitysirna_designno sensitive capabilitysite_directed_mutagenesisno sensitive capabilitytranslateno sensitive capabilityvariant_annotateno sensitive capabilityvariant_comparatorno sensitive capabilityverify_assemblyno sensitive capabilityverify_constructno sensitive capabilityvirtual_gelno sensitive capabilityvolcano_plot_datano sensitive capabilityworkflowno sensitive capability
Toxic flows 1
Cross-tool combinations that form a data-exfiltration primitive (untrusted input → sensitive source → external sink).
Versions 1
Scan history per published version. The engine is deterministic — the same version always yields the same score, so a changed score means the package itself changed.
| Version | Score | Findings | Engine | Scanned |
|---|---|---|---|---|
v1.1.0 latest |
A 97/100 | 1 | 1.10.0 | 2026-07-25 |
Embed this score
Show this server's live Trust Score in your README, docs or website. The badge is served straight from the registry and updates automatically after every rescan — no API key needed. It links back to this page, so anyone who sees the grade can also read the findings behind it instead of taking a number on faith.
Verify this score yourself
The score above is reproducible: the same package version always yields the same result. Run it locally or over the free API — no account, no LLM, fully deterministic.
npx mcptrustchecker scan https://seqbench.com/api/mcp --onlineMore in Data Science & ML
Security scan results for the 2sio MCP server.
ArXiv preprints + Google Scholar papers, with citation counts in one query.
Security scan results for the Add MCP server.
Security scan results for the Ai Archive MCP server.
Security scan results for the Aira Semanticscholar MCP server.
Korean premium short-term rental search: natural language or structured filters (SHV engine).